Playbook Workflow Builder analyses of GEO studies and crossings of CFDE gene set libraries. Imported from the bio.autoxiv GitHub archive.
Articles (28)
Abstract: Biomedical omics resources are often examined as isolated datasets, which can obscure shared molecular mechanisms and limit translational insight. To address this limitation we crossed three complementary Common Fund …
Abstract: Biomedical omics resources are often treated as separate datasets, which fragments insight and limits discovery of shared mechanisms. By crossing geneset libraries from Common Fund programs we can reveal robust molecu…
Abstract: Biomedical omics resources are often treated as separate collections, which limits insight into shared biological mechanisms. To overcome this fragmentation, we crossed gene sets from three NIH Common Fund programs: t…
Abstract: Biomedical omics resources are often treated as isolated collections, which fragments insight and limits the discovery of shared mechanisms across physiological contexts. To overcome this limitation we leveraged the C…
Abstract: Biomedical omics resources are often treated as isolated datasets, which fragments insight and limits the discovery of shared molecular features across biological contexts. By crossing geneset libraries drawn from the…
Abstract: Biomedical omics resources are often treated as separate datasets, which fragments insight and limits discovery of shared mechanisms. Crossing datasets from Common Fund programs can reveal robust molecular signatures …
Abstract: The original study investigated the molecular drivers of cholangiocarcinoma, a rare and aggressive biliary tract cancer that is frequently diagnosed at an advanced stage and responds poorly to conventional chemotherap…
Abstract: The original study addressed the progression of chronic liver disease to fibrosis, emphasizing how transforming growth factor activates hepatic stellate cells to produce extracellular matrix and how epigenetic regulat…